WebTitle Single Cell Analysis and Differential Expression Version 1.0.10 Description Analyzing and interactively exploring large-scale single-cell RNA-seq datasets. 'pagoda2' pri-marily performs normalization and differential gene expression analysis, with an interactive ap-plication for exploring single-cell RNA-seq datasets. WebSingle Cell Analysis and Differential Expression. v 1.0.10. GPL-3. Authors. Nikolas Barkas [aut], Viktor Petukhov [aut], Peter Kharchenko [aut], Simon Steiger [ctb], Evan …
SCDE by Kharchenko Lab at Harvard DBMI - GitHub Pages
WebJan 11, 2024 · To address this, we integrated single-cell multi-omics data and predicted the gene regulatory networks in AD and control for four major cell types, excitatory and inhibitory neurons, microglia and oligodendrocytes. WebApr 20, 2024 · In pagoda2: Single Cell Analysis and Differential Expression Pagoda2 R Documentation Pagoda2 R6 class Description The class encompasses gene count … how enable steam overlay
Characterizing transcriptional heterogeneity through pathway and …
WebJan 18, 2016 · The gene set–based approach and interactive interface implemented by PAGODA aim to identify significant transcriptional features distinguishing cells in a population and facilitate their... WebOct 23, 2024 · a, Top, PAGODA clustering of single-cell RNA-seq data from young and old fibroblasts as in Fig. 2f, showing Thy1 expression. Bottom, proportion of THY1 + PDGFRα + fibroblasts in fibroblast... WebNational Center for Biotechnology Information hideaway lake golf course east texas