Chipbase 2.0
WebSep 1, 2024 · ChIPBase has identified ∼151 187 000 regulatory relationships between ∼171 600 genes and ∼3000 regulators by analyzing ∼55 000 ChIP-seq datasets, which … WebJun 4, 2024 · Original ArticleH3K27 demethylase KDM6B aggravates ischemic brain injury through demethylation of IRF4 and Notch2-dependent SOX9 activation Lisha Chang,1 Zhaowang An,2 Jiang Zhang,1 Fuling Zhou,1 Dali Wang,1 Jian Liu,1 and Yunhe Zhang2 1The 2nd Department of Neurology, North China University of Science and …
Chipbase 2.0
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http://deepbase.sysu.edu.cn/chipbase/expression.php WebSorted significantly differentially expressed genes in colorectal cancer cells, and compared with ChIPBase v2.0. Carcinogenicity screening: Searched SEPIA to identify significant genes.
WebNational Center for Biotechnology Information WebThe protein module on the Chipbase v.2.0 website displayed binding sites in both the upstream and downstream regions of IRF4 and Notch2 (Figure 4B). The co-expression …
WebNews: ChIPBase v2.0 has been updated to v3.0 ! Jumping to ChIPBase v3.0 page to see more function and modules. How to cite: ChIPBase v2.0: decoding transcriptional … News: ChIPBase v2.0 has been updated to v3.0 ! Jumping to ChIPBase v3.0 page … LncRNA module allows users to browse genes that could be upstream or … miRNA module allows users to browse genes that could be upstream or … OtherNcRNA module allows users to browse genes that could be upstream or … Protein module allows users to browse genes that could be upstream or … Regulator module provides users with an interface to search for the DNA-binding … Motif provides users with a platform to visulize the binding motifs of … ChIP-Function tool help users predict the functions of DNA-binding proteins by … ChIP-seq allows users to download or browse the binding sites of the DNA … WebFeb 3, 2016 · ExtRaINSIGHT: Track the History of Harmful Mutations in the Human Genome The UEA sRNA Workbench 4.7.1 Alpha Available
WebChIPBase v2.0 is an open database for studying the transcription factor binding sites and motifs, and decoding the transcriptional regulatory networks of lncRNAs, miRNAs, other …
http://rna.sysu.edu.cn/chipbase/ theory is another word forWebmiRBase is the central online repository for microRNA (miRNA) nomenclature, sequence data, annotation and target prediction. The current release (10.0) contains 5071 miRNA loci from 58 species, expressing 5922 distinct mature miRNA sequences: a growth of over 2000 sequences in the past 2 years. miRBase provides a range of data to facilitate ... theory is best described asWebChIPBase v3.0 identified ~151,187,000 regulatory relationships between ~171,600 genes and ~3,000 regulators by analyzing ~55,000 ChIP-seq datasets, which represent a 30 … shrubs for landscaping dallas txWebJul 17, 2024 · The CHIPS Alliance announced it released the Advanced Interface Bus (AIB) version 2.0 draft specification on GitHub. AIB standard is an open-source, royalty-free … theory is defined asWebMar 29, 2024 · Decoded the regulatory mechanisms mediated by transcriptional regulators and epitranscriptomic codes and developed integrative analysis platforms (ChIPBase and dreamBase) for facilitating study of ... shrubs for landscaping austinWebName Description type Link References ChIPBase ChIPBase a database for Transcription factor-binding sites, motifs (~1290 transcription factors) and decoding the transcriptional … theory is directly relevant to why questionsWebJan 4, 2024 · ChIPBase v2.0 consists of nine web-based modules and tools. The LncRNA, miRNA, OtherNcRNA, Protein and Regualtor modules are mainly developed to … theory is fun grade 1 maureen cox